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REVIEW ARTICLES
Geographical distribution of cystic fibrosis; The past 70 years of data analyzis
Seyed Bashir Mirtajani, Poopak Farnia, Maryam Hassanzad, Jalaledin Ghanavi, Parissa Farnia, Ali Akbar Velayati
October-December 2017, 1(2):105-112
DOI
:10.4103/bbrj.bbrj_81_17
Cystic fibrosis (CF) has been generally well defined throughout the world although its prevalence is very difficult to ascertain for a number of reasons, including the fact that the medical/scientific literature and patient registries vary in quality in different countries. In the present review literature (1938–2017), we found out the higher frequency of registered CF patients in the European Union. This could be due to strong clinical awareness and greater health facilities. In contrast, we found a very irregular report from Asian and African countries. In these countries, the national CF registration system is mostly lacking or it is individualized-based research. In this situation, the estimation of various risk factors such as ethnicity and/or races is remained to be resolved. Overall, this review outlines the urgent need for revitalization of national and global CF registration, worldwide.
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16
39,296
2,894
Exploring potential of phage therapy for tuberculosis using model organism
Vijay Singh Gondil, Sanjay Chhibber
January-March 2018, 2(1):9-15
DOI
:10.4103/bbrj.bbrj_93_17
Antibiotics, one of the miracle discoveries of the 20
th
century after world war revolutionized the treatment and prophylaxis of infectious diseases. Antibiotics led to an increase in the quality of health-care system but with the emergence of antibiotic-resistant bacterial strains compromised their very potential. The WHO calls bacterial resistance as one of the major threats to global health, food security, and development today. Antibiotic resistance poses a need of alternative therapy to conventional antibiotics. As proved in preantibiotic era phage therapy is effective against a number of successful pathogens and can be used as an alternative strategy to restrain stern infections such as antibiotic resistance tuberculosis (TB). In the present paper, effectiveness of phage therapy and use of model organisms for developing treatment strategy for antibiotic-resistant TB is discussed so as to explore new possibilities in battle against antibiotic resistance.
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9
9,418
1,143
The relationship between nutrition and infectious diseases: A review
Sedigheh Farhadi, Roman S Ovchinnikov
July-September 2018, 2(3):168-172
DOI
:10.4103/bbrj.bbrj_69_18
Nutrition and infectious diseases are related to each other in some aspects. First, nutrition affects the development of human body immune system. Moreover, nutrition can influence emerge of infectious diseases (e.g., gastrointestinal infections), food poisoning, intestinal diseases, and systemic infectious diseases. In this review, the mentioned aspects of the relationship between nutrition and infections are discussed. Furthermore, the relationship between malnutrition and infectious diseases, nutrition in patients with severe combined immunodeficiency and relationship between overeating and infection are reviewed. Overall, some factors can weaken the body's ability to fight infection and cause malnutrition. The factors include anorexia, traditional behaviors, reduction of intestinal absorption, metabolic damage, disorder metabolism of lipids and carbohydrates, reduction of vitamins, iron, zinc, and copper. In the case of the relationship between malnutrition and infection, a large number of studies have illustrated a bidirectional interaction of malnutrition and infection. In this aspect, to treat serious acute malnutrition and limit the rate of death, some preventive studies applied antibiotics, probiotic bacteria, and prebiotic foods. In the future, studies may be conducted on intestinal or systematic immunomodulation.
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9
46,362
3,241
BRIEF REPORT
Macrolides and COVID-19: An optimum premise
Hayder M Al-Kuraishy, Marwa S Al-Naimi, Claire M Lungnier, Ali I Al-Gareeb
July-September 2020, 4(3):189-192
DOI
:10.4103/bbrj.bbrj_103_20
The epidemic of coronavirus infection disease 19 (COVID-19), which started in Wuhan City, is caused by severe acute respiratory syndrome coronavirus (SARS-CoV-2) which binds angiotensin-converting enzyme 2 (ACE2) receptor, which is highly expressed by the lung epithelial cells. In COVID-19-induced acute respiratory distress syndrome, a hyperinflammatory syndrome with hypercytokinemia leads to acute lung injury and the development of respiratory failure. Macrolides are broad-spectrum, bacteriostatic antibiotics with significant anti-inflammatory and immunomodulatory effects. Different preclinical and clinical studies have shown that macrolides inhibit cytokine release, attenuate the inflammatory response, and improve immunoglobulin response. Azithromycin potentiates the anti-SARS-CoV-2 activity of chloroquine in COVID-19. However, azithromycin alone is effective initially in the management of COVID-19 due to its antiviral and anti-inflammatory activity. The antiviral potential of azithromycin is linked to different mechanisms, including modulation of lysosomal activity and the interaction points between SARS-CoV-2 and ACE2 receptor. Therefore, macrolides, chiefly azithromycin, are an effective drug against COVID-19 through direct antiviral effect or via the modulation of hyperinflammatory status.
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5
2,459
274
ORIGINAL ARTICLES
Evaluation of
in silico
protein secondary structure prediction methods by employing statistical techniques
Kandavelmani Angamuthu, Shanmughavel Piramanayagam
July-September 2017, 1(1):29-36
DOI
:10.4103/bbrj.bbrj_28_17
Background:
With the advent of many new advanced techniques, sequences of a number of proteins have been made available. But the relative paucity of the experimentally determined three-dimensional structures of these proteins has paved way for the development of computational structure prediction methods. Protein secondary structure prediction is an essential step in modeling the tertiary structure. Among the various secondary structure prediction methods available, three different methods with unique working principles, namely, GOR, HNN, and SOPMA were evaluated for their efficiency to predict secondary structures.
Methods:
A set of 90 different proteins with known secondary structures from three major classes namely, mainly alpha, mainly beta, and mainly alpha beta was used as reference. Secondary structure data of these proteins obtained through experimental methods were compared with that of predictions made by GOR, HNN, and SOPMA respectively by employing various statistical analyses, namely paired sample test, correlation coefficient, standard deviation, standard error mean and scatter plots.
Results:
The secondary structure prediction tools namely, GOR and HNN were found to predict helical structures more accurately than the sheets. SOPMA was observed to predict sheets more accurately than helices.
Conclusion:
Based on the observed results, it could be concluded that there is no single tool that consistently predicts all the secondary structures accurately. It could also be anticipated that a combined use of these secondary prediction tools could further enhance the efficacy of
in silico
protein secondary structure prediction methods.
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5
3,349
366
Predictable repeatability issues with GeneXpert-Xpert MTB/RIF (version 4) derived rifampicin resistant tuberculosis results from South India: Appreciating the limits of a technological marvel!
Praveen Sanker, Ramya Puthukkudi Kottuthodi, Anusree Puthenveettil Ambika, Vishnu T Santhosh, Ravikrishnan Balakrishnan, Sunil Kumar Mrithunjayan, Hisham Moosan
July-September 2017, 1(1):76-80
DOI
:10.4103/bbrj.bbrj_6_17
Background:
GeneXpert MTB/RIF (Xpert), the fully automated cartridge-based nucleic acid amplification test for simultaneous identification of
Mycobacterium tuberculosis
complex and rifampicin resistance (RR), directly from samples is considered as a game changer for tuberculosis (TB) control programs worldwide.
Methods:
We are reporting serious issues with repeatability among a subgroup of Xpert (Version 4) identified RR results from South Indian state recently switched to Xpert by the National TB control program.
Results:
We have demonstrated that poor repeatability is frequently associated with those Xpert derived RR results, identified by detection of delayed amplification of any probe in the presence of positive analyte results for all probes. Another significant contributing factor was found to be lower bacterial loads in samples. The repeat tests were done by Xpert and/or by line probe assay depending on smear positivity. The finding is worrying as Xpert is recommended over other tests due to its reportedly better performance among low bacterial load samples such as pediatric, extra-pulmonary, HIV-TB co-infected, and smear negative pulmonary TB and the same samples, it seems are more likely to cause error prone RR results.
Conclusions:
We recommend for additional genotypic tests with specific mutant probes for detecting mutations at rpoB hot sites and growth based tests for all Xpert derived RR-TB cases identified by the above algorithm for confirmation of the presence of mutation, based on our available data.
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3,435
410
Correlation study between urinary tract bacterial infection and some acute inflammatory responses
Falah Hasan Obayes AL-Khikani, Ghusin alban Adnan Auda, Aalae Salman Ayit
October-December 2019, 3(4):236-239
DOI
:10.4103/bbrj.bbrj_122_19
Background:
There is no population in the world clear from urinary tract infection (UTI), especially among women. Urinary tract disease is a general term alluding to the bacterial infection anyplace in the urinary tract. It is commonly acknowledged that contamination of the upper urinary tract puts the patient in danger for kidney damage. The aim of the study was to identify the type of bacteria that cause UTI beside elevates the correlation between UTI and some inflammatory markers such as erythrocyte sedimentation rate, white blood cell, C-reactive protein (CRP), and hemoglobin for the UTI among patients in various sex and age groups.
Methods:
The study was carried in Baghdad Teaching Hospital during July 7, 2017–October 15, 2017. A sum of 45 UTI patients and 20 control group was collected.
Results:
The study showed that UTI increased in female than in male with 62.2% and 37.8%, respectively, and high risk at age 30–49 years with 42.2%. The microorganisms identified in this study were
Escherichia coli
(42.2%), followed by
Enterobacter
(8.9%),
Pseudomonas
and
Klebsiella
(6.7% for each),
Proteus
spp and
Serratia
spp (4.4% for each), and mixed culture (
E. coli + Proteus
and E. coli + Pseudomonas with 2.2% for each one).
Conclusion:
This study showed highly significant correlation between CRP and bacterial isolation.
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3,682
194
REVIEW ARTICLES
Impact of geographical information system on public health sciences
Jafar Aghajani, Parissa Farnia, Ali Akbar Velayati
October-December 2017, 1(2):94-100
DOI
:10.4103/bbrj.bbrj_34_17
In this brief review, the geographic information systems (GISs) and its beneficial influence in the field of health were discussed and highlighted. Basically, GIS is a computerized system that can significantly add to assess and monitor the effects of environmental factors (namely, population, air pollution, location, climatic changes) on public health problems. The main benefits of GIS in health services are mapping and/or visualizing of disease distribution, which will ultimately improves our understanding of disease diversities and their spatial patterns. Therefore, GIS technology is capable of providing the intra- and inter-logical connection between health, social services, and natural environment.
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4
6,846
770
Probiotics: The marvelous factor and health benefits
S Vijayaram, S Kannan
January-March 2018, 2(1):1-8
DOI
:10.4103/bbrj.bbrj_87_17
The aim of this study is well stated to address in recent advances on probiotics in the past 50 years. Probiotics are the living cell organisms. It is a presence in human and animal gut. The probiotic organisms are natural antibiotics in the human-animal gut. This reviews the main role mechanisms of action in probiotics such as probiotics are antibiotics, probiotics in antibacterial activity, probiotic action in fish gut bacteria, dietary supplements of probiotics, gastrointestinal microbiota of fishes, microbial community of the gastrointestinal tract of fish, bioactive compounds from probiotic bacteria, probiotic uses in cancer therapeutic applications, and applications of probiotics. The most common probiotics are used in many ways such as boosting the immune system, inhibition of pathogenic organism, prevention of cancer, reduction of inflammatory bowel disease, reducing cholesterol level, and synthesis of Vitamin A. Nowadays, food products are mainly involved in chemical preservatives. These preservative agents are causing the disease to affect the human health. The probiotic food products are used to the development of human-animal health.
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6,988
1,023
ORIGINAL ARTICLES
Outdoor air pollution affects tuberculosis development based on geographical information system modeling
Esmaeil Rajaei, Maryam Hadadi, Majid Madadi, Jafar Aghajani, Mohanad Mohsin Ahmad, Poopak Farnia, Jalaledin Ghanavi, Parissa Farnia, Ali Akbar Velayati
January-March 2018, 2(1):39-45
DOI
:10.4103/bbrj.bbrj_5_18
Background :
Daily intake of air is 30 Ib as compared with 2-Ib of food and 4½ of water. Thereby, breathing-contaminated air is as harmful as drinking or eating contaminated water or food, respectively. Recent research has highlighted the extent of outdoor air pollution in large cities and warranted high-quality studies to clarify the magnitude of the problem. Here, we evaluated the possible association between tuberculosis (TB) development and exposure to outdoor air pollution in a metropolitan city of Tehran.
Methods:
Extraction and analysis of relevant data. Investigation performed on TB patients (
n
= 1167) that were residing in Tehran for the past 10 years. The average concentration of sulfur dioxide (SO
2
), nitrogen dioxide, carbon monoxide (CO), and particles with an aerodynamic diameter of ≤ 2.5μm (PM
2.5
) and ≤ 10.0 (PM
10
) was measured from Tehran Air Quality Control Corporation (TAQCC). Patient and ecological informations were analyzed using geographical information system.
Results:
Based on TAQCC, Tehran had an average of 180–250 polluted days per year for the last 10 years. The high incidence of pulmonary TB (18 to 31/100,000) was detected in populations which were exposed to high concentration of CO (2.7 to 5.2 parts per million, 95% confidence interval [CI]; 1.10 to 1.90) and PM
2.5
(35 to 42μg/m
3
; 95% CI 1.03 to 1.80). The level of SO
2
,NO, and PM
10
was also high but not significantly related to TB (
P
> 0.05).
Conclusion:
The long-term exposure to PM
2.5
and CO was positively associated with TB development.
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4,812
499
High rates of human immunodeficiency virus and drug resistance in tuberculosis patients in Manila, Philippines
Marietta B Solante, Haorile Chagan-Yasutan, Toshio Hattori, Susan Leano, Anna Marie Celina G Garfin, Dick Van Soolingen, Elizabeth Telan
October-December 2017, 1(2):157-162
DOI
:10.4103/bbrj.bbrj_72_17
Background:
The incidence of tuberculosis (TB) in the Philippines is 288/100,000 populations (2014), wherein 2% of new cases and 21% of retreatment cases are multidrug-resistant TB (MDR-TB). In addition, the rate of human immunodeficiency virus (HIV) infection has been alarmingly over the past 7 years in the subpopulation of men who have sex with men in the Philippines. In June 2016, there were 841 new HIV-seropositive individuals reported to the HIV/AIDS and Antiretroviral Therapy Registry of the Philippines. In the present study, we aimed to investigate the prevalence of HIV among MDR-TB patients in a Manila hospital from 2011 to 2015.
Methods:
TB patients who referred to the programmatic management of drug-resistant TB (2012 to 2015) were tested for MDR-TB (using Xpert MTB/RIF assay) and HIV infection. In addition, the available data that belong to patients before the introduction of the Xpert MTB/RIF assay were included.
Results:
A total of 4515 presumptive drug-resistant TB patients were screened (2012–2015) to determine the percentage of MDR-TB cases: 16% (2012), 14% (2013), and 11% (2014 and 2015). Among the MDR-TB patients, the percentage of HIV-positive cases increased yearly: 0.5% (2011), 3% (2012), 5% (2013), 9% (2014), and 15% (2015). The high mortality rate ranged from 42% to 66%. The cure rate among the enrolled MDR-TB cases was 47% in 2012, which increased from 27% in 2011, but it did not improve thereafter (46% in 2013 and 51% in 2014).
Conclusion:
A remarkable increase in the prevalence of HIV among MDR-TB patients was found. The raises are alarming and need urgent attention on different risk factors and/or living style of patients.
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3,271
320
Effects of two-body wear on microfill, nanofill, and nanohybrid restorative composites
Efe Çetin Yilmaz, Recep Sadeler, Zeynep Yeşil Duymuş, Mustafa Öcal
July-September 2017, 1(1):25-28
DOI
:10.4103/bbrj.bbrj_36_17
Background:
The purpose of this study was to investigate two-body wear resistance and hardness of different three modern composite materials.
Methods:
In the conditions recommended by the manufacturer five pieces were produced from each material. All samples were kept in distill water for 1 week and determined Vickers hardness (HV) before two-body wear test. Then, two-body wear tests were performed using a computer controlled chewing simulator. In this study, the chewing simulator was programmed to provide a 2 mm vertical movement and a 0.7 mm horizontal movement. For each wear test, Al
2
O
3
with a diameter of 6 mm was used as antagonist material. The mean volume loss of all samples after the wear tests was determined with three dimensional profilometry. In addition to a random specimen was selected from each test group and SEM images were taken for analysis of wear tracks. Mean and standard deviation values were calculated and evaluated with the one-way ANOVA.
Results:
The hardness values of the materials tested in this study were measured between about 49 HV and 78 HV. Significantly, lowest mean volume loss was detected for the Heliomolar at about 3.1 μm3 whereas the highest mean volume loss was detected for the Silorane at about 6.4 μm3 after 360.000 chewing cycles.
Conclusions:
However, among the materials tested in this study suggested correlations between HV and two-body wear resistance are not significant.
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3
2,396
305
CASE REPORT
Pacemaker site infection caused by Rapidly Growing Nontuberculous Mycobacteria (RGM)
Jhansi Vani Devana, Narasimhan Calambur, B Ravinder Reddy
January-March 2018, 2(1):82-84
DOI
:10.4103/bbrj.bbrj_6_18
There has been an increased use of cardiac pacemaker device utilization in cardiac patients with a corresponding increase of device-related infections in these patients. The common cause of postpacemaker implantation infection is either Gram-positive or Gram-negative bacteria. Infection of pacemaker implantation site due to nontuberculous mycobacteria is rare. Globally, thirty-two cases of pacemaker device infections caused by nontuberculous mycobacteria were reported. It is important to carry out not only species identification of mycobacteria but also drug susceptibility testing to start precise treatment to those patients, who are infected with atypical mycobacteria. We report a patient with pacemaker pocket infection due to
Mycobacterium chelonae
.
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2
2,143
165
ORIGINAL ARTICLES
Thyroid dysfunction in early pregnancy and spontaneous abortion
Preeti Gahlawat, Aditi Singh, Smiti Nanda, Simmi Kharb
July-September 2017, 1(1):81-84
DOI
:10.4103/bbrj.bbrj_27_17
Background:
Pregnancy is associated with significant but reversible changes in thyroid function. Abnormal thyroid hormone levels could give rise to increased malplacentation increase to malplacentation that underlies the association between maternal thyroid dysfunction and adverse obstetric outcomes such as fetal brain damage, preterm births, and fetal death.
Aim:
The present study was planned to predict the risk of abortion in pregnancy by studying the relation between thyroid profile and rate of abortion.
Methods:
This prospective observational study was carried out in 100 pregnant women with a singleton pregnancy of 6–12 weeks of gestation in the Department of Biochemistry in collaboration with the Department of Obstetrics and Gynaecology, Pt. B.D. Sharma, PGIMS, Rohtak. The patients were divided into three groups, namely, Group 1 (
n
= 30, control group) included normal pregnant women with no history of abortion; Group 2 (
n
= 35) included pregnant females with previous history of abortion; and Group 3 (
n
= 35) comprised pregnant women coming with chief complaint of bleeding per vaginum. A volume of 5 mL blood sample was taken and serum was separated using centrifugation. Triiodothyronine (T
3
), thyroxine (T
4
), and thyroid stimulating hormone (TSH) levels were estimated by chemiluminiscence.
Results:
T
3
, T
4
and levels were comparable in all the three groups and the difference was not statistically significant. TSH levels were found to be negatively correlated with T
3
and T
4
values in the three groups. Only, 13% of the patients had spontaneous abortion. Nearly 6.66% of the patients in Group 1, 11.42% in Group 2 and 19.99% of patients in Group 3 ended up in abortion. TSH was found to be strongly associated with abortion in all the three groups (
P
≤ 0.001). TSH levels were significantly higher in the first trimester in women who had an abortion than pregnant women who had a successful continuation of pregnancy.
Conclusions:
TSH was strongly associated with abortion in the first trimester in all the three groups.
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2
8,784
510
Inhibition of mycobacterial CYP125 enzyme by sesamin and β-sitosterol: An
in silico
and
in vitro
study
Gauri Wankhade, Sarika Kamble, Shraddha Deshmukh, Lingaraja Jena, Pranita Waghmare, Bhaskar C Harinath
July-September 2017, 1(1):49-54
DOI
:10.4103/bbrj.bbrj_1_17
Background:
Cholesterol degradation pathway is one of the important pathways in survival of Mycobacterium tuberculosis (
Mtb
) bacilli, and steroid C26-monooxygenase (CYP125) enzyme of
Mtb
associated with this pathway is reported to be novel drug target. This study aims to find out novel, safe, and effective inhibitors against CYP125 from natural phytochemicals with reported anti-tubercular activity.
Methods:
Bioinformatics approach such as homology modeling, virtual screening, and molecular dynamics (MD) simulation was applied to identify best hits among all the shortlisted 148 compounds. The
Mtb
H37Ra bacilli growth was measured at optical density at 600 nm in minimal media supplemented with cholesterol and monitored for 10 days. Two promising compounds, namely, sesamin and β-sitosterol, were studied to determine their effective minimum inhibitory concentrations (MICs) in
Mtb
H37Ra bacilli culture.
Results:
In virtual screening, 15 compounds showed comparatively better binding affinity than natural substrate (choletst-4-en-3-one). In MD simulation study, the protein structure was observed to be stable in alls the interaction complexes, i.e., with choletst-4-en-3-one, sesamin, and β-sitosterol. The MICs of sesamin and β-sitosterol were observed to be 2 μg/ml, inhibiting the growth of the
Mtb
bacilli by 51% and 53%, respectively.
Conclusions:
From the above experimental findings, sesamin and β-sitosterol may be proposed as safe and potential inhibitors of CYP125 resulting in diminished growth of
Mtb
bacilli.
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2
2,338
242
Role of magnesium in preeclampsia
Simmi Kharb, K Goel, J Bhardwaj, S Nanda
July-September 2018, 2(3):178-180
DOI
:10.4103/bbrj.bbrj_70_18
Background:
The present study was planned to study the role of Mg in preeclampsia and its correlation with dietary intake of proteins and calories by analyzing serum Mg at 20 weeks, delivery, and cord blood Mg levels.
Methods:
The study was conducted in 102 pregnant women aged 17–36 years attending the outpatient department (OPD) before 20 weeks of gestation. The study samples were drawn twice: once before 20 weeks during visit in the OPD and second within 1 h of childbirth. Serum was analyzed for Mg levels using spectrophotometric method. Furthermore, thyroid-stimulating hormone and glucose challenge test were done as per the standard methods.
Results:
In normal pregnant women, the mean serum Mg level at <20 weeks of gestation was 2.03 ± 0.34 mg/dl, at term was 1.93 ± 0.41 mg/dl, and in cord blood was 1.84 ± 0.35 mg/dl.
Conclusion:
The study data support the hypothesis that Mg deficiency might be the causative factor in the development of preeclampsia.
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2
4,351
521
Immunoinformatic analysis of glycoprotein from bovine ephemeral fever virus
Mehran Bakhshesh, Mohammad Mehdi Ranjbar, Shokoofeh Almasi
July-September 2018, 2(3):208-212
DOI
:10.4103/bbrj.bbrj_71_18
Background:
Bovine ephemeral fever virus (BEFV) is an arthropod-borne virus that is highly infective for cattle and water buffalo. The infection has important economic losses and is common in tropical and subtropical regions. Surface glycoprotein (G protein) of BEFV is an immunogenic transmembrane G protein and responsible for attachment and entrance to host cells. The aim of this study was to determine immune dominant epitopes of the protein through immunoinformatics approaches.
Methods:
A reference sequence and some other related sequences of the G protein were retrieved. Three-dimensional structure of the protein was modeled and refined. Variation analysis of the protein sequences was done, and signal peptide and transmembrane topology were predicted. Finally, linear and conformational (discontinues) epitopes of the protein were predicted. Consensus linear and conformational epitopes were selected and reported as immunodominant epitopes.
Results:
Five regions were characterized as hyper variable regions (HVRs). Selected consensus epitopes included amino acids 46–60 (AA
46–60
), AA
67–74
, AA
132–149
, AA
156–188
, AA
196–225
, AA
260–282
, AA
315–456
, and AA
487–503
were selected as consensus epitopes.
Conclusion:
Four determined epitopes including AA
67–74
, AA
132–149
, AA
196–225
, and AA
315–456
were determined for the first time in this study. Other predicted epitopes in the current study, has been previously identified, however, new start and end regions for them were suggested here. The predicted epitopes may be experimentally tested to confirm as novel immunogenic candidates applicable in preventive and diagnostic tasks.
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2
1,621
222
Smear-negative pulmonary tuberculosis: Relative incidence and outcome of treatment in a drug-resistant endemic setting in Indochina
Pathum Sookaromdee, Viroj Wiwanitkit
April-June 2019, 3(2):109-110
DOI
:10.4103/bbrj.bbrj_138_18
Background:
Pulmonary tuberculosis is an important public health problem at present. The disease is still highly prevalent in several areas including tropical Indochina. In the area between Thailand and Myanmar body, the emerging drug-resistant tuberculosis is an interesting problem in the present day. Early diagnose and management of tuberculosis patient is important.
Methods:
In this specific article, the authors summarize and discuss on the locally available data on smear-negative pulmonary tuberculosis in a drug-resistant endemic foci in Indochina. The relative incidence and the outcome of the treatment are specifically focused.
Results:
Based on the present study, the outcome of the treatment of cases with smear-negative pulmonary tuberculosis is similar to cases with smear-positive pulmonary tuberculosis.
Conclusion:
Since the outcome of the treatment of cases with smear-negative pulmonary tuberculosis is similar to cases with smear-positive pulmonary tuberculosis, therefore, it is recommended for therapeutic management of those cases.
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2
998
112
Concurrent dengue and tuberculosis: An estimated incidence in endemic tropical country and explanation for low observed incidence
Beuy Joob, Viroj Wiwanitkit
April-June 2019, 3(2):111-116
DOI
:10.4103/bbrj.bbrj_37_19
Background:
In tropical developing countries, there are several common infectious diseases including tuberculosis and dengue. The concurrence between dengue and tuberculosis is possible.
Methods:
Here, the authors perform a mathematical model study to estimate the incidence of concurrent dengue and tuberculosis in Thailand, a tropical country in Indochina. The estimation is performed based on joint probability principle.
Results:
The estimated incidence of concurrent dengue and tuberculosis in the studied setting is equal to 0.148/100,000 population.
Conclusion:
There is a low incidence of concurrent dengue and tuberculosis, and this might be due to several possible reasons.
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2
1,824
132
Screening and optimization of staphylokinase from
Staphylococcus aureus
isolated from nasal swab of healthy students in Himachal Pradesh University, India
Kumari Deepa, Sameer Singh Faujdar, Wamik Azmi, Priya Mehrishi, Seema Solanki
October-December 2019, 3(4):228-232
DOI
:10.4103/bbrj.bbrj_128_19
Background:
One of virulence factors produced by
Staphylococcus aureus
is staphylokinase (SAK), which enhances their proteolytic activity leading to tissue damage and improving bacterial invasiveness. In the present study, we estimated the ability to produce SAK by
S. aureus
isolates from nasal carriers. We would like to verify relationship between SAK production and different
S. aureus
isolates.
Methods:
In this study, all nasal swab samples from healthy nasal carriers were collected and further processed in the Department of Biotechnology, Himachal Pradesh University. All
S. aureus
isolates were screened for SAK and optimization was done.
Results:
Out of all
S. aureus
isolates 20% isolates were positive for SAK production. Isolate SAK-24 shown increase in SAK production after optimization and response surface methodology (RSM).
Conclusion:
Production of SAK varies from strain to strains. SAK production can be increased by optimization and RSM.
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186
Isolation, characterization, statistical optimization, and application of a novel broad-spectrum capsular depolymerase against
Klebsiella pneumoniae
from
Bacillus siamensis
SCVJ30
Sanjay Chhibber, Vijay Singh Gondil, Jasreen Kaur
April-June 2018, 2(2):125-131
DOI
:10.4103/bbrj.bbrj_40_18
Background:
Bacterial resistance is one of the most challenging and emerging public healthcare crisis in the modern era. Along with antibiotic degrading strategies, bacteria also evolved to produce extracellular polymers such as capsular polysaccharide (CPS) which not only provides immune protection but also act as a permeability barrier to antibiotics. The use of therapeutic enzymes alone and in combination with antibiotics has opened a new window for clinicians and researchers.
Methods:
In the present study, isolation of broad-spectrum capsular depolymerase bacterium was attempted from a number of environmental samples followed by 16SrRNA characterization. Optimization of capsular depolymerase production was performed by the one variable at time (OVAT) method and response surface methodology (RSM). Capsular depolymerase was partially purified using ammonium sulfate saturation method. Capsule stripping effects of depolymerase were analyzed using microscopic visualization of the capsule and antibiotic susceptibility test.
Results:
Thirty-two capsular depolymerase producing bacteria were isolated in this study and broad-spectrum depolymerase producing Isolate-30 was characterized as
Bacillus siamensis
SCVJ30 according to the 16srRNA sequencing. Depolymerase production was optimized using OVAT method and RSM. Relatively high yields (1.92 IU/ml) of capsular depolymerase were obtained in a medium containing 1 mg magnesium sulfate, 7 mg peptone and at 9 pH. A 115% increase in capsular depolymerase production was observed under optimal conditions than unoptimized conditions. Microscopic visualization of the capsule and antibiotic susceptibility testing postulates the positive effect of depolymerase on antibiotic effi cacy against
Klebsiella pneumoniae
.
Conclusion:
Further characterization of the enzyme will help in developing broad-spectrum depolymerase as a potent therapeutic agent against drug-resistant strains.
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1,921
251
Detection of multidrug resistance and extensively drug resistance among smear-negative extrapulmonary tuberculosis cases in a reference laboratory
Srashty Sharma, M Hanif, Kamal Kishore Chopra, Mukesh Sharma, Kaushal Kumar Dwivedi, Zeeshan Sidiq, Himanshu Vashistha, Vasim Ahmed, Manoj Dubey
April-June 2018, 2(2):132-135
DOI
:10.4103/bbrj.bbrj_48_18
Background:
Extrapulmonary tuberculosis (EPTB) constitutes about 15%–20% of all cases of TB. Patients with EPTB are more likely to have negative sputum smear results. It is often hard to diagnose because of difficulty of sampling and paucibacillary nature of samples.
Methods:
Smear negative extra pulmonary (EP) specimens were included in the study. An attempt was made to recover M. tuberculosis (MTB) from such EP specimens using rapid liquid culture (MGIT 960). Molecular Line probe assay (LPA) was used to determine the resistant for first line drugs, and second line drug resistant was determined using liquid culture.
Results:
Culture positivity was found in 21.3% (133/623) of specimens; of these 95.48% (127/133) were found to be MTB and 4.51% (6/133) of specimens were found to be non tubercular mycobacteria. Among MTB detected 18.9% of specimens were multi drug resistant, 3.90% were Rifampicin mono-resistant and 13.30% were Isoniazid resistant. Second line DST (N=29) was performed for Kanamycin and Ofloxacin; of which 3.4 % was found to be resistant to both drugs, 3.4 % was found to be resistant to Ofloxacin and 93.1% were sensitive to both drugs.
Conclusion:
Large percentage of drug resistance was observed in the study. Early recovery of MTB and determination of its drug resistance helped in early initiation of treatment and controlled further transmission of drug-resistant TB in the population.
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2
2,200
269
Analysis of endothelial progenitor subpopulation cells, oxidative DNA damage, and their role in coronary artery disease
Mahaboob Vali Shaik, Munni Shaik, Subramanyam Gangapatnam
April-June 2018, 2(2):136-141
DOI
:10.4103/bbrj.bbrj_41_18
Background:
Endothelial dysfunction has been associated for the cause of atherosclerosis or cardiovascular diseases (CVDs). Endothelial progenitor cells (EPCs) are exposed to oxidative stress during vascular injury as residents of blood vessel walls or as circulating cells homing to the sites of neovascularization. The current study was designed to analyze various subpopulations of EPCs and their DNA damage in CVDs.
Methods:
The study included 50 coronary artery disease (CAD) patients which was confirmed by angiography and 50 age-matched healthy controls without CAD. Flow cytometric analysis performed to measure subpopulations in EPCs in the peripheral blood using markers such as CD34, CD133, VEGFR2, and CD45. Oxidative DNA damage was analyzed in CD34+ cells. Mean EPC count was expressed as a percentage of total white blood cells. Three different subpopulations with CD45−/CD133+/VEGFR2+, CD45−/CD34+/VEGFR2+, and CD45−/CD34+/CD133+ coexpressions were measured with various percentages.
Results:
Subpopulation of CD45−/CD34+/VEGFR2+ cells had shown significant (
P
= 0.001) decrease in CAD patients in comparison with the healthy controls. There was no significant difference in the subpopulations of CD45−/CD34+/CD133+ cells (
P
= 0.005) and CD45−/CD133+/VEGFR2+ cells (
P
= 0.005) in CAD and healthy controls. The CD45−/CD34+/VEGFR2+ subpopulation EPC showed positive correlation with the severity of coronary stenosis (
r
= 0.35,
P
= 0.026), while other EPC subpopulation count did not show any correlation. Oxidative DNA damage was higher in CAD compared with controls. The number of EPC subpopulation CD45−/CD34+/VEGFR2+ was inversely correlated with oxidative DNA damage (
P
= 0.001), hypertension (
P
= 0.001), and diabetes mellitus (
P
= 0.004).
Conclusion:
We observed an association between CD45−/CD34+/VEGFR2 subpopulation EPCs and DNA damage in CAD condition. These findings support a cell biologist in searching the role of EPC populations in the pathophysiology or diagnosis of the disease by a clinician.
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1,632
210
To evaluate total serum immunoglobulin E level and factors that effect on this level in Iraqi asthmatic children
Raghdah Maytham Hameed, Mohanad Mohsin Ahmed, Haidar Abdul Amir Najim Abood, Aqeel Mahdi Hussein
October-December 2019, 3(4):240-244
DOI
:10.4103/bbrj.bbrj_125_19
Background:
Immunoglobulin E (IgE) has an important role in allergic disease, especially in asthma because it is highly responsive to the allergens; hence, the measure of IgE levels helps in the diagnosis of asthma and monitoring the patient state.
Methods:
The 85 asthmatic children, including 59 males and 26 females with asthma who had ages between 1 and 16 years collected at Karbala Teaching Hospital for Children with healthy controls which have same age and gender, were measured total IgE levels for them by using EUROIMMUN IgE ELISA kit. The clinical characteristics of patients were recorded by questionnaire and measurement of absolute eosinophil count by peripheral blood smear.
Results:
There was highly significantly different in IgE levels between patients and controls (
P
< 0.001). High IgE level observed in 42 (49.4%) of asthmatic patients was relating to age, eosinophil count, exposure to cigarette smoke, the severity of asthma, and use of treatment.
Conclusions:
Total serum IgE has an important role in the diagnosis of asthma and there are many factors affect its levels in asthmatic patients.
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153
REVIEW ARTICLES
Useful approaches for reducing aflatoxin M1 content in milk and dairy products
Fatemeh Naeimipour, Jafar Aghajani, Saba Amiri Kojuri, Saman Ayoubi
April-June 2018, 2(2):94-99
DOI
:10.4103/bbrj.bbrj_59_18
The quality and safety of food are of major importance. Using contaminated animals' milk and meat may result in human disease. Among microorganisms, fungal toxins, especially aflatoxin B-1 (AFB1), are of special importance. Aflatoxin M-1 (AFM-1) is a metabolite that is produced by conversion and hydroxylation of AFB-1. Both toxins can cause acute and chronic mycotoxicosis mainly through ingestion of contaminated milk. Hence, it is critical to control and decrease these microorganisms. Despite cost-effective efforts, preventing foods contamination due to aflatoxins (AFs) is not only an expensive but also a difficult task. The best agricultural monitoring during preharvest and postharvest stages cannot eliminate the AFs, especially AFM-1 from milk and dairy products because of the high resistance of these toxins. There have been numerous studies investigating the methods of AF detoxification or reduction from infected milk. By focusing on advantages and disadvantages of preventative procedures using probiotics, antibodies, chemisorbents and even additives, one can choose one or several procedures to eliminate or reduce AFM-1 in milk and its byproducts efficiently.
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2
7,636
879
* Source: CrossRef
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rd
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