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  Indian J Med Microbiol
 

Figure 6: Graphical representation of the tertiary structure of the vaccine construct, the refined model, and validation chart. (a) Three-dimensional structure of the vaccine designed with a global model quality score of 0.2878 and estimated P = 2.488E-1 predicted by IntFOLD server. (b) A better quality of the three-dimensional structure refined with Galaxy web server. The GDT-HA value of the structure was 0.9555, RMSD 0.404, MolProbity 2.398, Clash score 18.7, Poor rotamers 0.6, and Rama favored 86.7. (c and d) Validation of the tertiary structure with ProSA-web server and PDB sum, respectively. The Z-score for the ProSA-web is 2.85 and most favored regions and G-Factors of the PDB sum were 71.6% and -0.38, respectively

Figure 6: Graphical representation of the tertiary structure of the vaccine construct, the refined model, and validation chart. (a) Three-dimensional structure of the vaccine designed with a global model quality score of 0.2878 and estimated P = 2.488E-1 predicted by IntFOLD server. (b) A better quality of the three-dimensional structure refined with Galaxy web server. The GDT-HA value of the structure was 0.9555, RMSD 0.404, MolProbity 2.398, Clash score 18.7, Poor rotamers 0.6, and Rama favored 86.7. (c and d) Validation of the tertiary structure with ProSA-web server and PDB sum, respectively. The Z-score for the ProSA-web is 2.85 and most favored regions and G-Factors of the PDB sum were 71.6% and -0.38, respectively